Alkaliflexus imshenetskii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Marinilabiliaceae; g__Alkaliflexus; s__Alkaliflexus imshenetskii
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Marinilabiliales; f__Marinilabiliaceae; g__Alkaliflexus; s__Alkaliflexus imshenetskii
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Marinilabiliales; f__Marinilabiliaceae; g__Alkaliflexus; s__Alkaliflexus imshenetskii; x__Alkaliflexus imshenetskii DSM 15055
NCBI Strain Identifiers Z-7010
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 96.74%
CheckM Contamination 1.09%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 47
N50 Contigs 431,941 bp
Longest Contig 745,751 bp
Scaffold Count 5
N50 Scaffolds 4,108,720 bp
Longest Scaffold 4,108,720 bp
Genome Size 4,122,270 bp
Protein Count 3,305
Coding Density 87.18%
GC Percentage 42.71%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51706v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597159
Country None
Date 2014-01-08
Genbank Assembly Accession GCA_000517065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,223
Refseq Category representative genome
Seq Rel Date 2014/01/08
Spanned Gaps 42
Species Taxid 286730
SSU Count 1
Submitter JGI
Taxid 927658
Total Gap Length 4200
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AJUM00000000.1