Methylomonas sp000515215
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylomonadaceae; g__Methylomonas; s__Methylomonas sp000515215
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylococcaceae; g__Methylomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylococcaceae; g__Methylomonas; s__Methylomonas sp. 11b
NCBI Strain Identifiers 11b
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 2
N50 Contigs 4,275,135 bp
Longest Contig 4,275,135 bp
Scaffold Count 1
N50 Scaffolds 5,412,720 bp
Longest Scaffold 5,412,720 bp
Genome Size 5,412,720 bp
Protein Count 4,987
Coding Density 88.37%
GC Percentage 51.40%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51521v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597267
Country USA
Date 2014-01-07
Genbank Assembly Accession GCA_000515215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 4,978
Refseq Category na
Seq Rel Date 2014/01/07
Spanned Gaps 1
Species Taxid 1168169
SSU Count 3
Submitter JGI
Taxid 1168169
Total Gap Length 100
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZXK00000000.1