Micromonospora arenicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora arenicola
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola; x__Salinispora arenicola CNB527
NCBI Strain Identifiers CNB527
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006716065.1)
Genome Characteristics
CheckM Completeness 99.09%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 126
N50 Contigs 131,187 bp
Longest Contig 323,930 bp
Scaffold Count 120
N50 Scaffolds 140,716 bp
Longest Scaffold 323,930 bp
Genome Size 5,981,449 bp
Protein Count 5,429
Coding Density 86.72%
GC Percentage 69.33%
Ambiguous Bases 156
GTDB representative GCA_006716065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51517v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597265
Country None
Date 2014-01-07
Genbank Assembly Accession GCA_000515175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 5,425
Refseq Category na
Seq Rel Date 2014/01/07
Spanned Gaps 6
Species Taxid 168697
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1137250
Total Gap Length 6176
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZXI00000000.1