Micromonospora arenicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora arenicola
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola; x__Salinispora arenicola CNQ748
NCBI Strain Identifiers CNQ748
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006716065.1)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.12%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 95
N50 Contigs 195,341 bp
Longest Contig 407,530 bp
Scaffold Count 90
N50 Scaffolds 204,770 bp
Longest Scaffold 407,530 bp
Genome Size 5,821,375 bp
Protein Count 5,093
Coding Density 87.22%
GC Percentage 69.55%
Ambiguous Bases 121
GTDB representative GCA_006716065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51497v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597255
Country None
Date 2014-01-07
Genbank Assembly Accession GCA_000514975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 5,129
Refseq Category na
Seq Rel Date 2014/01/07
Spanned Gaps 5
Species Taxid 168697
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 1144929
Total Gap Length 2572
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZWY00000000.1