Pseudomonas_E monteilii
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E monteilii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. LAIL14HWK12:I12
NCBI Strain Identifiers LAIL14HWK12:I12
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000730605.1)
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.71%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 30
N50 Contigs 348,291 bp
Longest Contig 1,015,160 bp
Scaffold Count 26
N50 Scaffolds 418,084 bp
Longest Scaffold 1,015,160 bp
Genome Size 5,575,902 bp
Protein Count 5,050
Coding Density 90.37%
GC Percentage 62.16%
Ambiguous Bases N/A
GTDB representative GCA_000730605.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51433v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597223
Country None
Date 2014-01-07
Genbank Assembly Accession GCA_000514335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 5,079
Refseq Category na
Seq Rel Date 2014/01/07
Spanned Gaps 4
Species Taxid 1259803
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1259803
Total Gap Length 2050
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZVS00000000.1