Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E putida_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. URIL14HWK12:I6
NCBI Strain Identifiers URIL14HWK12:I6
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 64
N50 Contigs 312,381 bp
Longest Contig 796,202 bp
Scaffold Count 61
N50 Scaffolds 314,082 bp
Longest Scaffold 796,202 bp
Genome Size 6,337,748 bp
Protein Count 5,649
Coding Density 87.72%
GC Percentage 60.01%
Ambiguous Bases 0
GTDB representative GCF_002588485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51419v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597216
Country None
Date 2014-1-7
Genbank Assembly Accession GCA_000514195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count 0
Protein Count 5,704
Refseq Category na
Seq Rel Date 2014/01/07
Spanned Gaps 3
Species Taxid 1283293
SSU Count 0
Submitter DOE Joint Genome Institute
Taxid 1283293
Total Gap Length 1209
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZVL00000000.1