Paracoccus sp000518925
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus; s__Paracoccus sp000518925
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Paracoccus; s__Paracoccus sp. J55
NCBI Strain Identifiers J55
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000518925.1)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 69
N50 Contigs 150,565 bp
Longest Contig 413,065 bp
Scaffold Count 64
N50 Scaffolds 150,565 bp
Longest Scaffold 413,065 bp
Genome Size 4,294,957 bp
Protein Count 4,162
Coding Density 89.88%
GC Percentage 68.07%
Ambiguous Bases 58
GTDB representative GCA_000518925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51397v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597205
Country None
Date 2014-01-07
Genbank Assembly Accession GCA_000513975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 4,140
Refseq Category na
Seq Rel Date 2014/01/07
Spanned Gaps 5
Species Taxid 935849
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 935849
Total Gap Length 2521
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZVA00000000.1