Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori Sahul64
NCBI Strain Identifiers Sahul64
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900478295.1)
Genome Characteristics
CheckM Completeness 99.42%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 54
N50 Contigs 78,473 bp
Longest Contig 162,946 bp
Scaffold Count 54
N50 Scaffolds 78,473 bp
Longest Scaffold 162,946 bp
Genome Size 1,644,275 bp
Protein Count 1,579
Coding Density 91.28%
GC Percentage 38.76%
Ambiguous Bases 1
GTDB representative GCA_900478295.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Velvet
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597453
Country Australia: Western Australia
Date 2014-01-06
Genbank Assembly Accession GCA_000513515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source biopsy from indigenous Australian
Latitude Longitude None
Molecule Count N/A
CDS Count 1,597
Refseq Category na
Seq Rel Date 2014/01/06
Spanned Gaps 0
Species Taxid 210
SSU Count 1
Submitter The University of Western Australia
Taxid 1222003
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALWV00000000.1