Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida; x__Pasteurella multocida subsp. multocida str. HB03
NCBI Strain Identifiers HB03
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 1
N50 Contigs 2,307,684 bp
Longest Contig 2,307,684 bp
Scaffold Count 1
N50 Scaffolds 2,307,684 bp
Longest Scaffold 2,307,684 bp
Genome Size 2,307,684 bp
Protein Count 2,107
Coding Density 89.01%
GC Percentage 40.36%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM51239v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02641508
Country None
Date 2013-12-31
Genbank Assembly Accession GCA_000512395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source diseased pig
Latitude Longitude None
Molecule Count 1
Protein Count 2,082
Refseq Category na
Seq Rel Date 2013/12/31
Spanned Gaps 0
Species Taxid 747
SSU Count 6
Submitter Huazhong Agricultural University
Taxid 1147130
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None