Pseudomonas_E sp002966775
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp002966775
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas fluorescens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas fluorescens group; s__Pseudomonas fluorescens; x__Pseudomonas fluorescens FH5
NCBI Strain Identifiers FH5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002966775.1)
Genome Characteristics
CheckM Completeness 99.8%
CheckM Contamination 0.95%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 87
N50 Contigs 133,959 bp
Longest Contig 623,907 bp
Scaffold Count 87
N50 Scaffolds 133,959 bp
Longest Scaffold 623,907 bp
Genome Size 6,178,427 bp
Protein Count 5,578
Coding Density 88.88%
GC Percentage 59.97%
Ambiguous Bases N/A
GTDB representative GCA_002966775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597452
Country None
Date 2013-12-19
Genbank Assembly Accession GCA_000511155.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fresh water
Latitude Longitude None
Molecule Count N/A
CDS Count 5,646
Refseq Category na
Seq Rel Date 2013/12/19
Spanned Gaps 0
Species Taxid 294
SSU Count 1
Submitter University of Exeter
Taxid 1284404
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOJA00000000.1