Propionimicrobium lymphophilum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionimicrobium; s__Propionimicrobium lymphophilum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionimicrobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Propionibacteriaceae; g__Propionimicrobium; s__Propionimicrobium sp. BV2F7
NCBI Strain Identifiers BV2F7
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000423485.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 6
N50 Contigs 551,493 bp
Longest Contig 751,071 bp
Scaffold Count 6
N50 Scaffolds 551,493 bp
Longest Scaffold 751,071 bp
Genome Size 2,027,970 bp
Protein Count 1,820
Coding Density 91.13%
GC Percentage 56.08%
Ambiguous Bases N/A
GTDB representative GCA_000423485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name PspBV2F7v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN00829146
Country None
Date 2013-12-18
Genbank Assembly Accession GCA_000510445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,809
Refseq Category na
Seq Rel Date 2013/12/18
Spanned Gaps 0
Species Taxid 1111131
SSU Count 1
Submitter JCVI
Taxid 1111131
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZIS00000000.1