Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Dorea; s__Dorea sp000509125
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; x__unclassified Clostridiales; x__unclassified Clostridiales (miscellaneous); s__Clostridiales bacterium VE202-26
NCBI Strain Identifiers VE202-26
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.37%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 26
N50 Contigs 297,304 bp
Longest Contig 640,846 bp
Scaffold Count 26
N50 Scaffolds 297,304 bp
Longest Scaffold 640,846 bp
Genome Size 3,915,227 bp
Protein Count 3,880
Coding Density 91.36%
GC Percentage 47.55%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM50912v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00009111
Country None
Date 2013-07-16
Genbank Assembly Accession GCA_000509125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,704
Refseq Category na
Seq Rel Date 2013/07/16
Spanned Gaps 0
Species Taxid 1232454
SSU Count 1
Submitter The University of Tokyo
Taxid 1232454
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BAII00000000.2