Methanolobus tindarius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanolobus; s__Methanolobus tindarius
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanomicrobia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanolobus; s__Methanolobus tindarius
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Methanomicrobia; o__Methanosarcinales; f__Methanosarcinaceae; g__Methanolobus; s__Methanolobus tindarius; x__Methanolobus tindarius DSM 2278
NCBI Strain Identifiers DSM 2278
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 3,151,883 bp
Longest Contig 3,151,883 bp
Scaffold Count 1
N50 Scaffolds 3,151,883 bp
Longest Scaffold 3,151,883 bp
Genome Size 3,151,883 bp
Protein Count 2,955
Coding Density 87.55%
GC Percentage 39.79%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM50420v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597164
Country Italy
Date 2013-12-05
Genbank Assembly Accession GCA_000504205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude 38.132591 N 15.05422 E
Molecule Count N/A
CDS Count 2,909
Refseq Category representative genome
Seq Rel Date 2013/12/05
Spanned Gaps 0
Species Taxid 2221
SSU Count 3
Submitter JGI
Taxid 1090322
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZAJ00000000.1