Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa MTB-1
NCBI Strain Identifiers MTB-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 1
N50 Contigs 6,580,038 bp
Longest Contig 6,580,038 bp
Scaffold Count 1
N50 Scaffolds 6,580,038 bp
Longest Scaffold 6,580,038 bp
Genome Size 6,580,038 bp
Protein Count 6,000
Coding Density 89.46%
GC Percentage 66.24%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM50404v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02389526
Country India
Date 2013-12-5
Genbank Assembly Accession GCA_000504045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source t-HCH contaminated soil
Latitude Longitude None
Molecule Count 1
CDS Count 6,187
Refseq Category na
Seq Rel Date 2013/12/05
Spanned Gaps 0
Species Taxid 287
SSU Count 4
Submitter Tohoku University
Taxid 1415629
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None