Mesorhizobium opportunistum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Mesorhizobium; s__Mesorhizobium opportunistum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Mesorhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Mesorhizobium; s__Mesorhizobium sp. LNHC221B00
NCBI Strain Identifiers LNHC221B00
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000176035.2)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 1.23%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 69
N50 Contigs 262,262 bp
Longest Contig 535,005 bp
Scaffold Count 69
N50 Scaffolds 262,262 bp
Longest Scaffold 535,005 bp
Genome Size 6,757,776 bp
Protein Count 6,558
Coding Density 86.92%
GC Percentage 62.85%
Ambiguous Bases 296
GTDB representative GCA_000176035.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Mloti_LNHC221B00
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02359663
Country None
Date 2013-12-03
Genbank Assembly Accession GCA_000502935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,584
Refseq Category na
Seq Rel Date 2013/12/03
Spanned Gaps 0
Species Taxid 1287233
SSU Count 1
Submitter University of Southern California
Taxid 1287233
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYWR00000000.1