Mesorhizobium sp000502715
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Mesorhizobium; s__Mesorhizobium sp000502715
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Mesorhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Mesorhizobium; s__Mesorhizobium sp. LSHC432A00
NCBI Strain Identifiers LSHC432A00
GTDB Type Material Designation not type material
GTDB Representative of Species True (39 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 21
N50 Contigs 689,196 bp
Longest Contig 1,705,985 bp
Scaffold Count 21
N50 Scaffolds 689,196 bp
Longest Scaffold 1,705,985 bp
Genome Size 5,990,865 bp
Protein Count 5,833
Coding Density 87.53%
GC Percentage 62.81%
Ambiguous Bases 155
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Mloti_LSHC432A00
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02359686
Country None
Date 2013-12-03
Genbank Assembly Accession GCA_000502715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,854
Refseq Category na
Seq Rel Date 2013/12/03
Spanned Gaps 0
Species Taxid 1287303
SSU Count 1
Submitter University of Southern California
Taxid 1287303
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYVU00000000.1