Mesorhizobium sp000502715
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Mesorhizobium; s__Mesorhizobium sp000502715
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Mesorhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Phyllobacteriaceae; g__Mesorhizobium; s__Mesorhizobium sp. LSHC424B00
NCBI Strain Identifiers LSHC424B00
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000502715.1)
Genome Characteristics
CheckM Completeness 98.93%
CheckM Contamination 0.9%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 56
N50 Contigs 337,647 bp
Longest Contig 1,010,911 bp
Scaffold Count 56
N50 Scaffolds 337,647 bp
Longest Scaffold 1,010,911 bp
Genome Size 6,650,135 bp
Protein Count 6,504
Coding Density 86.35%
GC Percentage 62.46%
Ambiguous Bases 383
GTDB representative GCA_000502715.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Mloti_LSHC424B00
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02359684
Country None
Date 2013-12-03
Genbank Assembly Accession GCA_000502675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,522
Refseq Category na
Seq Rel Date 2013/12/03
Spanned Gaps 0
Species Taxid 1287296
SSU Count 1
Submitter University of Southern California
Taxid 1287296
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYVW00000000.1