Borreliella burgdorferi
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Spirochaetia; o__Borreliales; f__Borreliaceae; g__Borreliella; s__Borreliella burgdorferi
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella burgdorferi
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Spirochaetales; f__Borreliaceae; g__Borreliella; s__Borreliella burgdorferi; x__Borreliella burgdorferi IPT92
NCBI Strain Identifiers IPT92
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008685.2)
Genome Characteristics
CheckM Completeness 96.17%
CheckM Contamination 1.64%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 18
Contig Count 182
N50 Contigs 16,444 bp
Longest Contig 48,153 bp
Scaffold Count 182
N50 Scaffolds 16,444 bp
Longest Scaffold 48,153 bp
Genome Size 1,237,793 bp
Protein Count 1,622
Coding Density 84.66%
GC Percentage 28.21%
Ambiguous Bases 1
GTDB representative GCA_000008685.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name BorBurgIPT92
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02378843
Country France: Guebwiller; Alsace
Date 2013-12-03
Genbank Assembly Accession GCA_000502055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,325
Refseq Category na
Seq Rel Date 2013/12/03
Spanned Gaps 0
Species Taxid 139
SSU Count 1
Submitter Animal Epidemiology Unit - INRA - Saint Genès Champanelle; CNR Borrelia - Pasteur Institute - Paris
Taxid 1408876
Total Gap Length 0
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYBZ00000000.1