Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori X47-2AL
NCBI Strain Identifiers X47-2AL
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900478295.1)
Genome Characteristics
CheckM Completeness 99.42%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 62
N50 Contigs 53,589 bp
Longest Contig 134,215 bp
Scaffold Count 62
N50 Scaffolds 53,589 bp
Longest Scaffold 134,215 bp
Genome Size 1,612,109 bp
Protein Count 1,557
Coding Density 91.43%
GC Percentage 38.90%
Ambiguous Bases N/A
GTDB representative GCA_900478295.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name HpX47v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469942
Country None
Date 2013-11-19
Genbank Assembly Accession GCA_000497465.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,569
Refseq Category na
Seq Rel Date 2013/11/19
Spanned Gaps 0
Species Taxid 210
SSU Count 1
Submitter Institut Pasteur
Taxid 1386083
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AWNG00000000.1