Lutibaculum baratangense
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Tepidamorphaceae; g__Lutibaculum; s__Lutibaculum baratangense
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhodobiaceae; g__Lutibaculum; s__Lutibaculum baratangense
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhodobiaceae; g__Lutibaculum; s__Lutibaculum baratangense; x__Lutibaculum baratangense AMV1
NCBI Strain Identifiers AMV1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.58%
CheckM Contamination 1.42%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 44
N50 Contigs 224,142 bp
Longest Contig 670,712 bp
Scaffold Count 44
N50 Scaffolds 224,142 bp
Longest Scaffold 670,712 bp
Genome Size 4,300,776 bp
Protein Count 4,081
Coding Density 90.51%
GC Percentage 68.58%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name LuBa1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469419
Country India: Baratang Island; Andamans
Date 2013-11-07
Genbank Assembly Accession GCA_000496075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source mud volcano
Latitude Longitude None
Molecule Count N/A
CDS Count 4,013
Refseq Category representative genome
Seq Rel Date 2013/11/07
Spanned Gaps 0
Species Taxid 1358440
SSU Count 1
Submitter Centre for Cellular and Molecular Biology
Taxid 631454
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AWXZ00000000.1