Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Tissierellales; f__Helcococcaceae; g__Parvimonas; s__Parvimonas micra
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Tissierellia; o__Tissierellales; f__Peptoniphilaceae; g__Parvimonas; s__Parvimonas micra
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Tissierellia; o__Tissierellales; f__Peptoniphilaceae; g__Parvimonas; s__Parvimonas micra; x__Parvimonas micra A293
NCBI Strain Identifiers A293
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900637905.1)
Genome Characteristics
CheckM Completeness 98.17%
CheckM Contamination 0.61%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 4
tRNA Count 20
Contig Count 50
N50 Contigs 122,624 bp
Longest Contig 407,487 bp
Scaffold Count 49
N50 Scaffolds 122,624 bp
Longest Scaffold 407,487 bp
Genome Size 1,680,794 bp
Protein Count 1,567
Coding Density 88.62%
GC Percentage 28.37%
Ambiguous Bases N/A
GTDB representative GCA_900637905.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name PM_A293
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471847
Country United Kingdom
Date 2013-10-28
Genbank Assembly Accession GCA_000493795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source abdominal abscess
Latitude Longitude None
Molecule Count N/A
CDS Count 1,555
Refseq Category na
Seq Rel Date 2013/10/28
Spanned Gaps 1
Species Taxid 33033
SSU Count 2
Submitter University of Malaya
Taxid 1408286
Total Gap Length 26
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AXUQ00000000.1