Lactobacillus helveticus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus helveticus; x__Lactobacillus helveticus CIRM-BIA 101
NCBI Strain Identifiers CIRM-BIA 101
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000160855.1)
Genome Characteristics
CheckM Completeness 98.38%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 5
tRNA Count 19
Contig Count 213
N50 Contigs 14,972 bp
Longest Contig 59,511 bp
Scaffold Count 213
N50 Scaffolds 14,972 bp
Longest Scaffold 59,511 bp
Genome Size 2,074,014 bp
Protein Count 2,408
Coding Density 85.76%
GC Percentage 37.15%
Ambiguous Bases 7
GTDB representative GCA_000160855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name LhCIRMBIA101V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272118
Country None
Date 2013-10-24
Genbank Assembly Accession GCA_000493575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,266
Refseq Category na
Seq Rel Date 2013/10/24
Spanned Gaps 0
Species Taxid 1587
SSU Count 4
Submitter INRA STLO
Taxid 1226336
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBUN000000000.1