Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae MGH 19
NCBI Strain Identifiers MGH 19
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 7
23S Count 9
tRNA Count 20
Contig Count 17
N50 Contigs 462,217 bp
Longest Contig 1,468,674 bp
Scaffold Count 2
N50 Scaffolds 5,010,050 bp
Longest Scaffold 5,010,050 bp
Genome Size 5,245,972 bp
Protein Count 4,854
Coding Density 87.60%
GC Percentage 57.52%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_MGH_19_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02138559
Country None
Date 2013-10-30
Genbank Assembly Accession GCA_000493115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,079
Refseq Category na
Seq Rel Date 2013/10/30
Spanned Gaps 15
Species Taxid 573
SSU Count 7
Submitter Broad Institute
Taxid 1328364
Total Gap Length 7030
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYJL00000000.1