Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae UCICRE 4
NCBI Strain Identifiers UCICRE 4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 9
tRNA Count 20
Contig Count 22
N50 Contigs 382,069 bp
Longest Contig 1,238,466 bp
Scaffold Count 3
N50 Scaffolds 4,821,690 bp
Longest Scaffold 4,821,690 bp
Genome Size 5,548,439 bp
Protein Count 5,149
Coding Density 87.42%
GC Percentage 57.24%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_UCI_4_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02138609
Country None
Date 2013-10-30
Genbank Assembly Accession GCA_000492595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,418
Refseq Category na
Seq Rel Date 2013/10/30
Spanned Gaps 19
Species Taxid 573
SSU Count 8
Submitter Broad Institute
Taxid 1328391
Total Gap Length 8568
Translation Table 11
tRNA Count (total) 86
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYIL00000000.1