Klebsiella variicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
NCBI Strain Identifiers UCICRE 10
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000828055.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.07%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 12
N50 Contigs 1,342,103 bp
Longest Contig 1,602,618 bp
Scaffold Count 1
N50 Scaffolds 5,380,268 bp
Longest Scaffold 5,380,268 bp
Genome Size 5,380,268 bp
Protein Count 4,961
Coding Density 87.85%
GC Percentage 57.61%
Ambiguous Bases N/A
GTDB representative GCA_000828055.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_UCI_10_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02138615
Country None
Date 2013-10-30
Genbank Assembly Accession GCA_000492475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,119
Refseq Category na
Seq Rel Date 2013/10/30
Spanned Gaps 11
Species Taxid 244366
SSU Count 8
Submitter Broad Institute
Taxid 244366
Total Gap Length 3762
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYIF00000000.1