Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae BIDMC 21
NCBI Strain Identifiers BIDMC 21
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.67%
CheckM Strain Heterogeneity 40.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 23
N50 Contigs 686,279 bp
Longest Contig 1,261,727 bp
Scaffold Count 11
N50 Scaffolds 4,134,145 bp
Longest Scaffold 4,134,145 bp
Genome Size 5,481,480 bp
Protein Count 5,073
Coding Density 87.39%
GC Percentage 57.15%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_BIDMC_21_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02138651
Country None
Date 2013-10-30
Genbank Assembly Accession GCA_000492395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,353
Refseq Category na
Seq Rel Date 2013/10/30
Spanned Gaps 12
Species Taxid 573
SSU Count 8
Submitter Broad Institute
Taxid 1328416
Total Gap Length 4891
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYIB00000000.1