Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Worthington; x__Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607
NCBI Strain Identifiers ATCC 9607
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 98.87%
CheckM Contamination 1.15%
CheckM Strain Heterogeneity 30.0
5S Count 8
16S Count 3
23S Count 7
tRNA Count 20
Contig Count 346
N50 Contigs 33,233 bp
Longest Contig 162,864 bp
Scaffold Count 346
N50 Scaffolds 33,233 bp
Longest Scaffold 162,864 bp
Genome Size 4,776,921 bp
Protein Count 4,672
Coding Density 87.46%
GC Percentage 52.20%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM48626v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01823739
Country None
Date 2013-10-28
Genbank Assembly Accession GCA_000486265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,970
Refseq Category na
Seq Rel Date 2013/10/28
Spanned Gaps 0
Species Taxid 28901
SSU Count 4
Submitter FDA
Taxid 1173940
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AOXK00000000.1