Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Newport; x__Salmonella enterica subsp. enterica serovar Newport str. RI_10P068
NCBI Strain Identifiers RI_10P068
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 25.0
5S Count 6
16S Count 1
23S Count 4
tRNA Count 19
Contig Count 69
N50 Contigs 130,519 bp
Longest Contig 446,739 bp
Scaffold Count 69
N50 Scaffolds 130,519 bp
Longest Scaffold 446,739 bp
Genome Size 4,682,399 bp
Protein Count 4,423
Coding Density 87.68%
GC Percentage 52.22%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM48395v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02415190
Country None
Date 2013-10-25
Genbank Assembly Accession GCA_000483955.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,684
Refseq Category na
Seq Rel Date 2013/10/25
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter FDA
Taxid 997342
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYEB00000000.1