Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa X13273
NCBI Strain Identifiers X13273
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.43%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 23
N50 Contigs 726,489 bp
Longest Contig 1,568,358 bp
Scaffold Count 15
N50 Scaffolds 1,568,358 bp
Longest Scaffold 2,350,913 bp
Genome Size 7,043,434 bp
Protein Count 6,520
Coding Density 89.32%
GC Percentage 66.02%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Pseu_aeru_X13273_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02360672
Country USA
Date 2013-10-24
Genbank Assembly Accession GCA_000481705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 6,719
Refseq Category na
Seq Rel Date 2013/10/24
Spanned Gaps 8
Species Taxid 287
SSU Count 4
Submitter Broad Institute
Taxid 1402500
Total Gap Length 5742
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AXRC00000000.1