Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa BL04
NCBI Strain Identifiers BL04
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.78%
CheckM Strain Heterogeneity 12.5
5S Count 3
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 24
N50 Contigs 374,087 bp
Longest Contig 2,235,033 bp
Scaffold Count 11
N50 Scaffolds 1,560,393 bp
Longest Scaffold 2,434,840 bp
Genome Size 7,333,384 bp
Protein Count 6,785
Coding Density 88.74%
GC Percentage 65.91%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Pseu_aeru_BL04_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02360717
Country USA
Date 2013-10-24
Genbank Assembly Accession GCA_000481065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source General Eye
Latitude Longitude None
Molecule Count N/A
CDS Count 6,961
Refseq Category na
Seq Rel Date 2013/10/24
Spanned Gaps 13
Species Taxid 287
SSU Count 6
Submitter Broad Institute
Taxid 1402545
Total Gap Length 13482
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AXPW00000000.1