Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa BL05
NCBI Strain Identifiers BL05
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 3
23S Count 4
tRNA Count 20
Contig Count 15
N50 Contigs 1,318,254 bp
Longest Contig 2,724,692 bp
Scaffold Count 3
N50 Scaffolds 5,663,406 bp
Longest Scaffold 5,663,406 bp
Genome Size 6,383,294 bp
Protein Count 5,789
Coding Density 89.29%
GC Percentage 66.47%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Pseu_aeru_BL05_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02360718
Country USA
Date 2013-10-24
Genbank Assembly Accession GCA_000481045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Corneal Scraping
Latitude Longitude None
Molecule Count N/A
CDS Count 5,930
Refseq Category na
Seq Rel Date 2013/10/24
Spanned Gaps 12
Species Taxid 287
SSU Count 3
Submitter Broad Institute
Taxid 1402546
Total Gap Length 23977
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AXPV00000000.1