Pseudomonas_B luteola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_B; s__Pseudomonas_B luteola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. HPB0071
NCBI Strain Identifiers HPB0071
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002091675.1)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.76%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 34
N50 Contigs 440,144 bp
Longest Contig 801,836 bp
Scaffold Count 9
N50 Scaffolds 4,272,059 bp
Longest Scaffold 4,272,059 bp
Genome Size 5,701,016 bp
Protein Count 5,344
Coding Density 87.19%
GC Percentage 55.19%
Ambiguous Bases N/A
GTDB representative GCA_002091675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Pseu_sp_HPB0071_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01779564
Country None
Date 2013-10-22
Genbank Assembly Accession GCA_000478505.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,183
Refseq Category na
Seq Rel Date 2013/10/22
Spanned Gaps 25
Species Taxid 1203578
SSU Count 4
Submitter Broad Institute
Taxid 1203578
Total Gap Length 41820
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AQFP00000000.1