Pasteurella multocida
Isolate HQ 16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; x__Pasteurella multocida 93002
NCBI Strain Identifiers 93002
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.68%
CheckM Strain Heterogeneity 66.67
5S Count 0
16S Count 3
23S Count 4
tRNA Count 13
Contig Count 317
N50 Contigs 14,178 bp
Longest Contig 45,703 bp
Scaffold Count 317
N50 Scaffolds 14,178 bp
Longest Scaffold 45,703 bp
Genome Size 2,195,908 bp
Protein Count 2,130
Coding Density 90.19%
GC Percentage 40.35%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM47823v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02470556
Country Sri Lanka
Date 2013-6-18
Genbank Assembly Accession GCA_000478235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,078
Refseq Category na
Seq Rel Date 2013/06/18
Spanned Gaps 0
Species Taxid 747
SSU Count 4
Submitter Moredun Research Institute
Taxid 1298926
Total Gap Length 0
Translation Table 11
tRNA Count (total) 18
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARNX00000000.1