Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori SA222C
NCBI Strain Identifiers SA222C
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900478295.1)
Genome Characteristics
CheckM Completeness 99.36%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 100.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 120,958 bp
Longest Contig 332,735 bp
Scaffold Count 38
N50 Scaffolds 120,958 bp
Longest Scaffold 332,735 bp
Genome Size 1,630,022 bp
Protein Count 1,578
Coding Density 91.42%
GC Percentage 38.95%
Ambiguous Bases N/A
GTDB representative GCA_900478295.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SA222C
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272079
Country None
Date 2013-9-27
Genbank Assembly Accession GCA_000476435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,577
Refseq Category na
Seq Rel Date 2013/09/27
Spanned Gaps 0
Species Taxid 210
SSU Count 1
Submitter MHH
Taxid 1345511
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBON000000000.1