Helicobacter pylori_A
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori SA47A
NCBI Strain Identifiers SA47A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001653455.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 43
N50 Contigs 269,337 bp
Longest Contig 297,588 bp
Scaffold Count 43
N50 Scaffolds 269,337 bp
Longest Scaffold 297,588 bp
Genome Size 1,670,767 bp
Protein Count 1,599
Coding Density 90.43%
GC Percentage 38.43%
Ambiguous Bases N/A
GTDB representative GCA_001653455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SA47A
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272045
Country None
Date 2013-9-27
Genbank Assembly Accession GCA_000476295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,569
Refseq Category na
Seq Rel Date 2013/09/27
Spanned Gaps 0
Species Taxid 210
SSU Count 1
Submitter MHH
Taxid 1345537
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBOT000000000.1