Helicobacter pylori_A
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori; x__Helicobacter pylori SA175C
NCBI Strain Identifiers SA175C
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001653455.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 26
N50 Contigs 211,308 bp
Longest Contig 390,395 bp
Scaffold Count 26
N50 Scaffolds 211,308 bp
Longest Scaffold 390,395 bp
Genome Size 1,617,911 bp
Protein Count 1,525
Coding Density 90.55%
GC Percentage 38.54%
Ambiguous Bases N/A
GTDB representative GCA_001653455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SA175C
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272687
Country None
Date 2013-9-27
Genbank Assembly Accession GCA_000476215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,527
Refseq Category na
Seq Rel Date 2013/09/27
Spanned Gaps 0
Species Taxid 210
SSU Count 1
Submitter MHH
Taxid 1345587
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBOI000000000.1