Salmonella enterica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Kentucky; x__Salmonella enterica subsp. enterica serovar Kentucky str. 29166
NCBI Strain Identifiers 29166
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.79%
CheckM Contamination 0.93%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 6
tRNA Count 18
Contig Count 190
N50 Contigs 77,296 bp
Longest Contig 286,851 bp
Scaffold Count 190
N50 Scaffolds 77,296 bp
Longest Scaffold 286,851 bp
Genome Size 4,996,094 bp
Protein Count 4,797
Coding Density 87.07%
GC Percentage 51.91%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN001163_01.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01816164
Country USA:CT
Date 2013-10-17
Genbank Assembly Accession GCA_000474435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chicken Breast
Latitude Longitude None
Molecule Count N/A
CDS Count 5,089
Refseq Category na
Seq Rel Date 2013/10/17
Spanned Gaps 0
Species Taxid 28901
SSU Count 4
Submitter FDA
Taxid 1124951
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AUQG00000000.1