Luteimonas sp000472505
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Luteimonas; s__Luteimonas sp000472505
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Luteimonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Luteimonas; s__Luteimonas sp. J29
NCBI Strain Identifiers J29
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.78%
CheckM Contamination 1.03%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 19
N50 Contigs 394,850 bp
Longest Contig 656,809 bp
Scaffold Count 16
N50 Scaffolds 394,850 bp
Longest Scaffold 656,809 bp
Genome Size 3,401,613 bp
Protein Count 3,045
Coding Density 90.46%
GC Percentage 71.93%
Ambiguous Bases 19
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM47250v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02441455
Country None
Date 2013-09-30
Genbank Assembly Accession GCA_000472505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,021
Refseq Category na
Seq Rel Date 2013/09/30
Spanned Gaps 3
Species Taxid 935863
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 935863
Total Gap Length 444
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AWZR00000000.1