Psychrobacter aquaticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Psychrobacter; s__Psychrobacter aquaticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Psychrobacter; s__Psychrobacter aquaticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Psychrobacter; s__Psychrobacter aquaticus; x__Psychrobacter aquaticus CMS 56
NCBI Strain Identifiers CMS 56
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 0.55%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 195,473 bp
Longest Contig 535,134 bp
Scaffold Count 38
N50 Scaffolds 195,473 bp
Longest Scaffold 535,134 bp
Genome Size 3,216,409 bp
Protein Count 2,717
Coding Density 83.97%
GC Percentage 43.10%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name PsAq1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469418
Country Antarctica: McMurdo Dry Valley
Date 2013-09-24
Genbank Assembly Accession GCA_000471625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source cyanobacterial mats
Latitude Longitude None
Molecule Count N/A
CDS Count 2,708
Refseq Category na
Seq Rel Date 2013/09/24
Spanned Gaps 0
Species Taxid 248452
SSU Count 1
Submitter Centre for Cellular and Molecular Biology
Taxid 1354303
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AUSW00000000.1