Escherichia dysenteriae
Isolate HQ 16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli Wa2
NCBI Strain Identifiers Wa2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 16
Contig Count 714
N50 Contigs 29,155 bp
Longest Contig 218,335 bp
Scaffold Count 605
N50 Scaffolds 30,861 bp
Longest Scaffold 218,335 bp
Genome Size 5,286,861 bp
Protein Count 5,318
Coding Density 87.69%
GC Percentage 50.18%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name E_coliWa2-1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02335232
Country None
Date 2013-09-24
Genbank Assembly Accession GCA_000471605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,774
Refseq Category na
Seq Rel Date 2013/09/24
Spanned Gaps 109
Species Taxid 562
SSU Count 2
Submitter Department of Pediatrics, Washington University School of Medicine
Taxid 1392874
Total Gap Length 2180
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AWQO00000000.1