Lactobacillus acidophilus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus; x__Lactobacillus acidophilus CIP 76.13
NCBI Strain Identifiers CIP 76.13
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001591845.1)
Genome Characteristics
CheckM Completeness 98.3%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 55
N50 Contigs 58,772 bp
Longest Contig 166,831 bp
Scaffold Count 34
N50 Scaffolds 166,831 bp
Longest Scaffold 671,357 bp
Genome Size 1,951,821 bp
Protein Count 1,876
Coding Density 87.90%
GC Percentage 34.58%
Ambiguous Bases N/A
GTDB representative GCA_001591845.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name LaCIP7613V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2272342
Country None
Date 2013-8-27
Genbank Assembly Accession GCA_000469705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,900
Refseq Category na
Seq Rel Date 2013/08/27
Spanned Gaps 21
Species Taxid 1579
SSU Count 1
Submitter INRA STLO
Taxid 1226675
Total Gap Length 2386
Translation Table 11
tRNA Count (total) 58
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CBLQ000000000.1