Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida; x__Pasteurella multocida subsp. multocida str. PMTB
NCBI Strain Identifiers PMTB
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 94.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 8
N50 Contigs 536,136 bp
Longest Contig 651,974 bp
Scaffold Count 8
N50 Scaffolds 536,136 bp
Longest Scaffold 651,974 bp
Genome Size 2,203,419 bp
Protein Count 2,053
Coding Density 89.24%
GC Percentage 40.44%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM46909v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02469964
Country Malaysia: Kelantan
Date 2013-9-19
Genbank Assembly Accession GCA_000469095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,032
Refseq Category na
Seq Rel Date 2013/09/19
Spanned Gaps 0
Species Taxid 747
SSU Count 3
Submitter Institute of Bioscience
Taxid 1220026
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AWTD00000000.1