Serratia_A fonticola
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Serratia_A; s__Serratia_A fonticola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Serratia; s__Serratia fonticola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Serratia; s__Serratia fonticola; x__Serratia fonticola LMG 7882
NCBI Strain Identifiers LMG 7882
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001006005.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 363
N50 Contigs 49,766 bp
Longest Contig 229,755 bp
Scaffold Count 363
N50 Scaffolds 49,766 bp
Longest Scaffold 229,755 bp
Genome Size 5,895,861 bp
Protein Count 5,638
Coding Density 86.91%
GC Percentage 53.61%
Ambiguous Bases N/A
GTDB representative GCA_001006005.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name sf7882_v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02471347
Country Portugal
Date 2013-09-18
Genbank Assembly Accession GCA_000469035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source freshwater
Latitude Longitude None
Molecule Count N/A
CDS Count 5,499
Refseq Category na
Seq Rel Date 2013/09/18
Spanned Gaps 0
Species Taxid 47917
SSU Count 1
Submitter Rede Paraense de gen├┤mica e prote├┤mica
Taxid 1378072
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AVAH00000000.1