Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; sb__Campylobacter jejuni subsp. jejuni; x__Campylobacter jejuni subsp. jejuni 00-2425
NCBI Strain Identifiers 00-2425
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 1,718,982 bp
Longest Contig 1,718,982 bp
Scaffold Count 1
N50 Scaffolds 1,718,982 bp
Longest Scaffold 1,718,982 bp
Genome Size 1,718,982 bp
Protein Count 1,762
Coding Density 93.61%
GC Percentage 30.51%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM46891v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02603723
Country Canada
Date 2014-9-26
Genbank Assembly Accession GCA_000468915.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool sample
Latitude Longitude None
Molecule Count 1
CDS Count 1,762
Refseq Category na
Seq Rel Date 2014/09/26
Spanned Gaps 0
Species Taxid 197
SSU Count 3
Submitter Public Health Agency of Canada
Taxid 1357994
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None