Vibrio alginolyticus
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio alginolyticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio alginolyticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio alginolyticus; x__Vibrio alginolyticus NBRC 15630 = ATCC 17749
NCBI Strain Identifiers NBRC 15630
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000354175.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 3
23S Count 1
tRNA Count 15
Contig Count 76
N50 Contigs 221,121 bp
Longest Contig 454,207 bp
Scaffold Count 76
N50 Scaffolds 221,121 bp
Longest Scaffold 454,207 bp
Genome Size 5,049,668 bp
Protein Count 4,534
Coding Density 87.21%
GC Percentage 44.59%
Ambiguous Bases N/A
GTDB representative GCA_000354175.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM46714v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00041824
Country None
Date 2013-09-13
Genbank Assembly Accession GCA_000467145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,575
Refseq Category na
Seq Rel Date 2013/09/13
Spanned Gaps 0
Species Taxid 663
SSU Count 3
Submitter National Institute of Technology and Evaluation
Taxid 1219076
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BATK00000000.1