| GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea dispersa |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa |
| Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea dispersa; x__Pantoea dispersa EGD-AAK13 |
| NCBI Strain Identifiers | EGD-AAK13 |
| GTDB Type Material Designation | not type material |
| GTDB Representative of Species | True (22 genomes in species cluster) |
| CheckM Completeness | 99.98% |
|---|---|
| CheckM Contamination | 0.25% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 3 |
| 16S Count | 1 |
| 23S Count | 1 |
| tRNA Count | 18 |
| Contig Count | 39 |
| N50 Contigs | 237,706 bp |
| Longest Contig | 552,709 bp |
| Scaffold Count | 39 |
| N50 Scaffolds | 237,706 bp |
| Longest Scaffold | 552,709 bp |
| Genome Size | 4,764,584 bp |
| Protein Count | 4,377 |
| Coding Density | 88.29% |
| GC Percentage | 57.81% |
| Ambiguous Bases | N/A |
| GTDB representative of species | True |
| Assembly Level | Contig |
|---|---|
| Assembly Name | GS De Novo Assembly |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMN02469686 |
| Country | India: MS |
| Date | 2013-9-11 |
| Genbank Assembly Accession | GCA_000465555.2 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | vegetable market soil |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 4,349 |
| Refseq Category | representative genome |
| Seq Rel Date | 2013/09/11 |
| Spanned Gaps | 0 |
| Species Taxid | 59814 |
| SSU Count | 1 |
| Submitter | National Environmental Engineering Research Institute-CSIR |
| Taxid | 1358411 |
| Total Gap Length | 0 |
| Translation Table | 11 |
| tRNA Count (total) | 66 |
| Type Material | None |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | AVSS00000000.1 |