Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli B94
NCBI Strain Identifiers B94
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 15
23S Count 14
tRNA Count 20
Contig Count 56
N50 Contigs 288,311 bp
Longest Contig 695,747 bp
Scaffold Count 56
N50 Scaffolds 288,311 bp
Longest Scaffold 695,747 bp
Genome Size 5,516,678 bp
Protein Count 5,321
Coding Density 86.69%
GC Percentage 50.41%
Ambiguous Bases 1
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM46244v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01883255
Country None
Date 2013-8-29
Genbank Assembly Accession GCA_000462445.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,768
Refseq Category na
Seq Rel Date 2013/08/29
Spanned Gaps 0
Species Taxid 562
SSU Count 15
Submitter IGS
Taxid 1151232
Total Gap Length 0
Translation Table 11
tRNA Count (total) 112
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AVRF00000000.1