Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli B7-2
NCBI Strain Identifiers B7-2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 13
23S Count 13
tRNA Count 20
Contig Count 55
N50 Contigs 300,513 bp
Longest Contig 618,032 bp
Scaffold Count 55
N50 Scaffolds 300,513 bp
Longest Scaffold 618,032 bp
Genome Size 5,488,472 bp
Protein Count 5,282
Coding Density 87.08%
GC Percentage 50.38%
Ambiguous Bases 2
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM46240v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01883253
Country USA: WA
Date 2013-8-29
Genbank Assembly Accession GCA_000462405.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,718
Refseq Category na
Seq Rel Date 2013/08/29
Spanned Gaps 0
Species Taxid 562
SSU Count 14
Submitter IGS
Taxid 1151216
Total Gap Length 0
Translation Table 11
tRNA Count (total) 109
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AVRD00000000.1