Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli B26-2
NCBI Strain Identifiers B26-2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002949675.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 8
23S Count 13
tRNA Count 20
Contig Count 57
N50 Contigs 249,372 bp
Longest Contig 550,379 bp
Scaffold Count 57
N50 Scaffolds 249,372 bp
Longest Scaffold 550,379 bp
Genome Size 5,554,557 bp
Protein Count 5,370
Coding Density 86.90%
GC Percentage 50.38%
Ambiguous Bases N/A
GTDB representative GCA_002949675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM46191v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01883258
Country USA: WA
Date 2013-8-29
Genbank Assembly Accession GCA_000461915.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,802
Refseq Category na
Seq Rel Date 2013/08/29
Spanned Gaps 0
Species Taxid 562
SSU Count 10
Submitter IGS
Taxid 1151226
Total Gap Length 0
Translation Table 11
tRNA Count (total) 104
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AVQV00000000.1