Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa B3-CFI
NCBI Strain Identifiers B3-CFI
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.43%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 314
N50 Contigs 87,472 bp
Longest Contig 263,611 bp
Scaffold Count 314
N50 Scaffolds 87,472 bp
Longest Scaffold 263,611 bp
Genome Size 6,751,908 bp
Protein Count 6,416
Coding Density 89.36%
GC Percentage 66.23%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name B3-CFI
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2271953
Country None
Date 2013-8-14
Genbank Assembly Accession GCA_000455425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,553
Refseq Category na
Seq Rel Date 2013/08/14
Spanned Gaps 0
Species Taxid 287
SSU Count 2
Submitter DTU
Taxid 1365011
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBMS000000000.1